Bands show streaking, smearing, or uneven migration patterns. Multiple bands may merge or appear poorly resolved with inconsistent migration across the gel.
Common Causes
1Incompatible sample buffer composition affecting protein charge or solubility
2Inadequate salt concentration in lysis buffer causing poor protein migration
3Insufficient detergent (SDS) concentration in sample buffer
4Incorrect sample buffer to lysate ratio during preparation
5pH variation in sample preparation buffers
Solutions
1Verify adequate salt concentration in lysis buffer (typically 150 mM NaCl)
2Ensure proper detergent concentration (standard 1-2% SDS in sample buffer)