Home Failure Case Library High Signal in Negative Cell Populations
Flow Cytometry (CST Guide) moderate

High Signal in Negative Cell Populations

Symptom
Off-target cell populations such as monocytes show unexpectedly high fluorescence signal. Non-specific staining obscures true positive populations.
Common Causes
  1. 1 Fc surface receptors on monocytes or other cells binding Fc portion of primary or secondary antibodies
  2. 2 Excessive primary or secondary antibody causing non-specific binding
  3. 3 Incomplete washing between antibody incubation steps leaving unbound antibody
Solutions
  1. 1 Block cells with Bovine Serum Albumin, Fc receptor blocking reagents, or normal serum from same host as primary/secondary antibody prior to staining
  2. 2 Include secondary-antibody-only control to determine if background originates from primary or secondary antibody
  3. 3 Perform additional wash steps between antibody incubations to remove unbound antibody
Related Video (2)
Bilibili (China-Accessible Mirrors) ★ 85
Flow Cytometry Complete Workflow: Sample to Analysis
"Complete flow cytometry workflow with troubleshooting section directly addresses staining artifacts and non-specific binding issues that cause high signal in negative populations"
BioLegend ★ 78
Surface and Intracellular Cytokine Staining for Flow Cytometry
"Surface and intracellular staining protocol video covers reagent selection and staining steps where Fc receptor blocking and antibody choice are critical to prevent off-target binding"
Source: cellsignal.com ↗
← Back to all cases