Home Microscopy & Imaging Laser Confocal Microscope | How To Set Up Confocal Multicolor Experiments
Steps
  1. 1 Introduce the Stellaris Confocal Microscope 00:06
  2. 2 Select Fluorophores for Your Sample 00:25
  3. 3 Assign Fluorophores to Detection Channels 00:40
  4. 4 Enable Live View and Verify Image Quality 00:59
  5. 5 Fine-Tune Imaging Parameters as Needed 01:20
  6. 6 Save Optimized Settings for Future Use 01:32
Microscopy & Imaging Leica Microsystems

Laser Confocal Microscope | How To Set Up Confocal Multicolor Experiments

Protocol
Difficulty
intermediate

Steps

1
Introduce the Stellaris Confocal Microscope

The video introduces the Stellaris confocal microscope system and its new Image Compass user interface, which reimagines the acquisition workflow for setting up multicolor fluorescence experiments.

▶ 00:06
2
Select Fluorophores for Your Sample

Identify and select the fluorophores present in your specimen from the list displayed at the top of the screen. The example demonstrates setting up an experiment with five fluorophores.

▶ 00:25
3
Assign Fluorophores to Detection Channels

Drag and drop each selected fluorophore into one of the available detection channels using the intuitive interface. Image Compass automatically optimizes excitation and detection parameters for the fluorophore combination.

▶ 00:40
4
Enable Live View and Verify Image Quality

Switch on the live view mode to display the captured image in real-time, showing rich detail, contrast, and information with minimal user training required.

▶ 00:59
5
Fine-Tune Imaging Parameters as Needed

Access the control panel to adjust gain and laser intensity settings for optimal results. Monitor changes in real-time through the live view display.

▶ 01:20
6
Save Optimized Settings for Future Use

Save the configured experimental parameters at any time to apply the same settings to other samples with identical preparation, increasing experimental efficiency.

▶ 01:32

🚨 Failure Case Library (1) + Submit your own case

critical
Improper Channel and Fluorophore Assignment
Everything glows in green/yellow channels. Dim targets overwhelmed by autofluorescence. Blue and green channels showing high background across tissue types. Spectral crowding and bleed-through between channels.
💡 5 · ✓ 6
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