Home Cell Biology How to Perform a 24-Well Transwell Assay | TEER & Lucifer Yellow Validation
Steps
  1. 1 Receive and store transwell plates 00:09
  2. 2 Liquefy and replace shipping medium 01:09
  3. 3 Incubate plates until assay day 03:16
  4. 4 Measure transepithelial electrical resistance 03:26
  5. 5 Perform experimental assay 05:39
  6. 6 Rinse and prepare for Lucifer yellow test 06:18
  7. 7 Incubate with Lucifer yellow tracer 07:37
  8. 8 Measure fluorescence and analyze results 08:44
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How to Perform a 24-Well Transwell Assay | TEER & Lucifer Yellow Validation

Protocol
Difficulty
intermediate

Steps

1
Receive and store transwell plates

Unbox the 24-well transwell plates upon arrival and store them at room temperature in a dark location with parafilm wrap intact until the day of medium replacement.

▶ 00:09
2
Liquefy and replace shipping medium

Incubate plates at 37°C in 5% CO₂ for 4 hours to liquefy the shipping medium, then transfer to laminar flow hood and use a 24-well manifold to aspirate medium from apical and basal compartments. Dispense pre-warmed cell culture medium into both compartments using a multi-channel pipette.

▶ 01:09
3
Incubate plates until assay day

Return apical inserts to basal compartment, replace the plate lid, and incubate in a cell culture incubator until the assay day. Change medium multiple times if assay is postponed.

▶ 03:16
4
Measure transepithelial electrical resistance

Sterilize electrodes in ethanol for 5 minutes and equilibrate in pre-warmed cell culture medium for 5 minutes. Allow the plate to reach room temperature, then carefully insert electrodes into the apical and basal compartments without touching the monolayer and record resistance values in ohms for 20-30 seconds per well.

▶ 03:26
5
Perform experimental assay

Conduct your chosen assay on the transwell plates following standard protocols. This step is at the discretion of the researcher.

▶ 05:39
6
Rinse and prepare for Lucifer yellow test

Dilute Lucifer yellow stock solution in transport assay buffer, pre-warm at 37°C, and protect from light. Gently rinse apical and basal compartments with transport assay buffer (250 µL and 750 µL respectively), then remove the rinse buffer.

▶ 06:18
7
Incubate with Lucifer yellow tracer

Add 750 µL of transport assay buffer to basal compartment and 250 µL of Lucifer yellow working dilution to apical compartment. Incubate the plate protected from light in a 37°C cell incubator for 1 hour.

▶ 07:37
8
Measure fluorescence and analyze results

Collect samples from the basal compartment and calibration curve, load them into an empty 96-well plate, and read fluorescence intensity using a fluorometer at 485/527 nm excitation/emission wavelengths.

▶ 08:44

🚨 Failure Case Library (4) + Submit your own case

severe
Too few cells migrated through the membrane — barely visible
Field of view shows only a handful of cells on the lower surface of the insert; counts are too low for meaningful statistics.
💡 4 · ✓ 4
moderate
Too many migrated cells — packed solid, can't count
Lower surface is densely covered with cells that fuse together; individual cells cannot be counted.
💡 4 · ✓ 4
moderate
Staining is too light — cells hard to discern
Cells on the membrane are very faintly colored; impossible to count confidently or photograph clearly.
💡 5 · ✓ 4
moderate
Cells are unevenly distributed across the membrane — poor reproducibility
Different fields of view show wildly different cell density; replicate inserts disagree.
💡 4 · ✓ 4
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