Strong autofluorescence across multiple channels in blood-rich tissues such as spleen, liver, brain, bone marrow, and vascularized tumors. Heme and porphyrins dominate signal especially when tissue is not thoroughly perfused.
Common Causes
1Residual red blood cells containing heme and porphyrins
2Insufficient perfusion prior to fixation
3High tissue vascularity
4Blood clotting during perfusion
Solutions
1Perfuse with PBS prior to fixation when possible
2Include approximately 10 U/mL heparin in perfusion solution to reduce clotting
3For human/postmortem or non-perfused tissues, wash sections longer
4Consider pigment quenchers such as Sudan Black B or cupric sulfate
5Assign low-abundance targets to far-red channels where RBC background is lower