Home › Failure Case Library › High Background Staining in IHC
Immunohistochemistry (CST Guide) moderate

High Background Staining in IHC

Symptom
Excessive background signal obscuring specific staining. Non-specific binding observed throughout tissue sections, making interpretation difficult.
Common Causes
  1. 1 Inadequate deparaffinization causing spotty, uneven background
  2. 2 Endogenous peroxidase activity in tissues producing excess background with HRP-based detection
  3. 3 Insufficient blocking (less than 30 minutes or improper blocking buffer)
  4. 4 Inadequate washing between antibody incubations (fewer than 3×5 min washes with TBST)
  5. 5 Antibody concentration too high for the specific tissue or detection system
Solutions
  1. 1 Repeat experiment with new tissue sections using fresh xylene for complete deparaffinization
  2. 2 Quench endogenous peroxidase: incubate slides in 3% H₂O₂ (diluted in RODI water) for 10 minutes prior to primary antibody
  3. 3 Ensure adequate blocking: use 1X TBST #9997 with 5% Normal Goat Serum #5425 for 30 minutes before primary antibody
  4. 4 Wash slides 3 times for 5 minutes with TBST #9997 after both primary and secondary antibody incubations
  5. 5 Titrate antibody to lower concentration; follow product datasheet recommendations for dilution
Related Video (3)
Bilibili (China-Accessible Mirrors) ★ 94
Immunohistochemistry on Paraffin-Embedded Sections (CST Demo)
"CST's own step-by-step IHC demo on paraffin sections directly covers the technique whose deparaffinization failure is described."
Bilibili (China-Accessible Mirrors) ★ 78
Complete IHC Immunohistochemistry Protocol for Beginners
"Beginner-friendly full IHC workflow from sample prep to mounting clearly shows correct deparaffinization and blocking steps to avoid background."
Cell Signaling Technology ★ 72
Better IHC Step 1: Antigen Retrieval
"CST troubleshooting series on better IHC staining addresses causes of high background and how to optimize the protocol."
Source: cellsignal.com ↗
← Back to all cases