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PCR (Sigma Guide) moderate
Incorrect Reaction Efficiency Due to Oligo Binding to Non-Molecular Biology Tubes
Symptom
Variable and incorrect standard curve efficiency when using serial dilutions; effect more pronounced when same dilution series stored at 4°C and reused; inconsistent differences between amplification plots; problem resolves when different operator uses different tubes
Common Causes
1Template oligonucleotides binding to non-molecular biology grade plastic tubes
2Loss of template through adsorption to tube walls during storage
3Use of inappropriate plasticware without low-retention properties
4Extended storage at 4°C exacerbates binding effects
Solutions
1Switch to molecular biology-grade, low retention plasticware (e.g., Eppendorf 1.5 mL tubes)
2Prepare fresh dilution series immediately before use
3Avoid storing dilutions for extended periods, especially at 4°C
4Verify all plasticware used is suitable for molecular biology applications
5Use certified low-binding tubes for oligonucleotide and template storage