Home Cell Biology How to isolate RNA from tissue or cells
Steps
  1. 1 Prepare workspace and gather materials 00:06
  2. 2 Homogenize tissue sample with TRIzol reagent 00:35
  3. 3 Extract RNA with chloroform separation 01:03
  4. 4 Transfer RNA layer and precipitate with ethanol 01:31
  5. 5 Bind RNA to silicon membrane column 01:52
  6. 6 Wash bound RNA with buffer solutions 02:13
  7. 7 Elute pure RNA from column 02:51
  8. 8 Store isolated RNA at low temperature 03:19
Cell Biology Thermo Fisher Scientific

How to isolate RNA from tissue or cells

Protocol
Difficulty
intermediate

Steps

1
Prepare workspace and gather materials

Put on lab coat, gloves, and safety glasses. Prepare your work area and gather all necessary materials including the TRIzol Plus RNA purification kit, wash buffers, and equipment.

▶ 00:06
2
Homogenize tissue sample with TRIzol reagent

Add 1 mL of TRIzol reagent to 50-100 micrograms of fresh or frozen tissue or cells. Homogenize thoroughly using a tissue rotor stator homogenizer and let stand at room temperature for 5 minutes.

▶ 00:35
3
Extract RNA with chloroform separation

Add 2 mL of chloroform and shake the tube vigorously for 15 seconds. Let sit at room temperature for 2-3 minutes, then centrifuge at 12,000g for 15 minutes at 4°C to separate into three distinct layers.

▶ 01:03
4
Transfer RNA layer and precipitate with ethanol

Transfer 400 microliters of the colorless upper aqueous layer containing RNA to a fresh RNase-free tube. Add an equal volume of 70% ethanol and mix thoroughly by vortexing.

▶ 01:31
5
Bind RNA to silicon membrane column

Transfer 700 microliters of the ethanol-RNA sample to a PureLink silicon membrane column inserted into a 2 mL collection tube. Centrifuge at 12,000g for 15 seconds and discard the flow-through.

▶ 01:52
6
Wash bound RNA with buffer solutions

Add 700 microliters of Wash Buffer 1 and centrifuge at 12,000g for 15 seconds. Repeat with 500 microliters of Wash Buffer 2, then dry the column by centrifuging at 12,000g for 1 minute, discarding flow-through after each step.

▶ 02:13
7
Elute pure RNA from column

Insert the column into a recovery tube and add the appropriate volume of elution buffer based on starting amount. Incubate at room temperature for 1 minute, then centrifuge at 12,000g for 2 minutes to collect the purified RNA.

▶ 02:51
8
Store isolated RNA at low temperature

The ultra-pure RNA is now in the recovery tube and ready for use or storage at -20°C for future applications.

▶ 03:19

🚨 Failure Case Library (1) + Submit your own case

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Low A260/230 Ratio Indicates Contaminant Carryover
Spectrophotometric analysis shows A260/230 ratio below 1.8-2.0, indicating residual guanidine salt or other chaotropic agent contamination in the purified RNA.
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