Home Failure Case Library Low A260/230 Ratio Indicates Contaminant Carryover
RNA Cleanup moderate

Low A260/230 Ratio Indicates Contaminant Carryover

Symptom
Spectrophotometric analysis shows A260/230 ratio below 1.8-2.0, indicating residual guanidine salt or other chaotropic agent contamination in the purified RNA.
Common Causes
  1. 1 Wash steps incomplete or skipped entirely before elution
  2. 2 Column tip contacted flow-through during wash steps, re-introducing contaminants
  3. 3 Insufficient centrifugation after wash steps - residual wash buffer remains on column
  4. 4 Collection tube reused without removing residual wash buffer from tube rim
Solutions
  1. 1 Perform all wash steps as specified in protocol; do not skip or reduce number of washes
  2. 2 During wash and elution steps, carefully avoid contact between column tip and flow-through; if contact occurs, repeat centrifugation for 1 minute
  3. 3 After final wash, centrifuge column for full recommended time to remove all traces of wash buffer
  4. 4 When reusing collection tubes, blot the rim of the tube on a Kimwipe before reattaching to column
  5. 5 If A260/230 remains low, perform an additional wash step or repeat the entire cleanup procedure
Related Video (3)
Bilibili (China-Accessible Mirrors) ★ 78
RNeasy Series RNA Extraction Kit Protocol
"RNeasy kit protocol directly demonstrates column-based wash steps critical for removing chaotropic salts and achieving proper A260/230 ratios"
Bilibili (China-Accessible Mirrors) ★ 75
Trizol RNA Extraction: Protocol & Principles
"Combines hands-on Trizol protocol with mechanistic explanation of separation chemistry, helping identify where incomplete wash steps lead to salt carryover"
Thermo Fisher Scientific ★ 72
How to isolate RNA from tissue or cells
"TRIzol Plus RNA Purification Kit demonstration includes purification workflow where wash step execution directly impacts final RNA purity metrics"
Source: neb.com ↗
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